CDS

Accession Number TCMCG073C01608
gbkey CDS
Protein Id XP_010538568.1
Location complement(join(5390115..5390228,5390317..5390739,5390832..5391131,5391254..5391397,5391497..5391550,5391629..5391698,5391958..5391987,5392064..5392149,5392233..5392328,5392448..5392525,5392614..5392739,5392846..5392950,5393032..5393187,5393282..5393398,5393485..5393592,5393666..5393742,5393920..5393992,5394132..5394269,5394363..5394407,5394765..5394885,5395042..5395128,5395233..5395297,5395618..5395815,5395917..5396207,5396303..5396524,5397116..5397361))
Gene LOC104812869
GeneID 104812869
Organism Tarenaya hassleriana

Protein

Length 1189aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010540266.1
Definition PREDICTED: DNA-directed RNA polymerase II subunit 2 isoform X1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00180        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03010        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005665        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGATTACAACGAATACGAACAGCAATACGTAGATGAAGATGATGACGAGGATATCACCCAGGAGGACGCTTGGGCCGTCATCTCCGCCTACTTCGAGGAGAAAGGTCTCGTGCGTCAACAGCTCGATTCTTTCGACGAGTTCATTCAGAACACGATGCAGGAAATTGTTGATGAATCCGCTAATATCGAGATCCGACCAGAGTCGCAGCACAATCCCGGTCACCAGTCTGATTTCGCTGAGACAATCTACAAGATCAGCTTTGGCCAGATTTATTTGAGTAAACCAATGATGACAGAGTCTGATGGAGAGACTGCAACCTTGTTTCCCAAGGCTGCGAGGTTGAGGAATCTCACGTATTCTGCACCATTGTATGTAGATGTTACTAAGAGAGTTATCAAGAAAGGCCATGATGGTGAGGAAGTTACGGAAACACAGGATTTTACCAAAGTTTTTATTGGCAAGGTTCCTATTATGCTTCGGTCTAGCTATTGTACCTTGTATCAGAATTCGGAGAAAGATTTAACAGAGCTAGGGGAGTGCCCCTACGACCAAGGTGGATACTTTATAATTAATGGGAGTGAAAAAGTTCTTATTGCTCAGGAAAAGATGAGCACAAATCATGTTTATGTTTTCAAGAAGAGGCAACCGAATAAATACGCCTATGTAGCTGAAGTTCGTTCCATGGCTGAGAACCAAAATAGGCCTCCAAGCACAATGTTTGTTCGTATGCTTTCTCGAGCCAGTTCCAAAGGGGGGTCGTCTGGGCAGTATATTCGCTGCACCCTTCCATACATCAGAACTGAAATTCCTATTATCATTGTGTTTCGAGCATTAGGATTTGTTGCGGATAAGGACATATTGGAACACATTTGCTATGATTTTTCCGATACTCAGATGATGGAATTGCTCCGGCCTTCCTTGGAAGAAGCCTTTGTTATTCAAAATCAACAGGTTGCGCTTGACTATATAGGGAAACGTGGAGCAACTGTCGGAGTAACCAGGGATAAGAGGATAAAGTATGCTAAAGATATCCTTCAGAAAGAAATGCTTCCTCATGTTGGAACTGGGGATTTTTGTGAGACGAAGAAGGCATATTATTTTGGGTATATCATACACCGTTTGCTGCTTTGTGCTATTGGCCGGAGGCCAGAAGATGACAGGGATCATTATGGCAACAAAAGGCTGGATCTTGCCGGTCCTTTACTTGGAGGCTTGTTTAGAATGCTTTTCAGAAAGCTGACAAGGGATGTTAGATCTTATGTACAGAAGTGTGTTGACAATGGAAAGGATGTCAATCTTCAATTTGCTATTAAGGCTAAGACTATCACATCTGGCCTCAAATATTCTCTTGCTACTGGGAATTGGGGGCAAGCGAATGCTGCTGGTACCAGAGCTGGAGTCTCGCAGGTGTTAAATCGATTAACATATGCTTCCACTTTGTCACACTTAAGGCGGTTGAATTCTCCTATAGGACGTGAAGGAAAATTGGCAAAACCGCGACAACTGCACAACTCACAGTGGGGAATGATGTGCCCTGCTGAAACGCCTGAAGGACAGGCTTGTGGTCTGGTGAAAAACTTGGCACTCATGGTCTACATAACAGTTGGGTCAGCTGCCTACCCCATATTGGAATTTTTGGAAGAATGGGGTACTGAAAATTTTGAGGAAATCTCTCCAGCAGTTATTCCCCAGGCAACTAAAATTTTTGTTAATGGATGTTGGGTTGGAATTCATCGAGATCCTGATATGTTAGTAAAAACATTGAGACGTTTGAGAAGACGGGTTGATGTTAACACTGAAGTCGGTGTTGTTAGAGATATTCGTCTCAAGGAGCTCCGGATTTATACCGACTATGGCAGGTGCAGTCGTCCATTATTCATTGTTGAGAATCAGTCGCTTCTAATAAAGAAGAAGGATATCTATGCTTTGCAACAAAGGGAAAGCTCTGAAGAAGGTGGCTGGCATGACCTTGTAGCAAAGGGTTTTATAGAATATATAGATACAGAGGAAGAAGAGACGACGATGATTTCCATGACTATCAATGATCTGGTACAAGCTAAATTGCGCCCTGAAGAAGCTTATTCTGATACTTATACACACTGTGAGGTTCACCCATCGTTGATATTGGGTGTATGTGCTTCAATTATTCCGTTTCCTGACCATAATCAGTCACCTCGTAACACATACCAATCTGCCATGGGTAAGCAAGCGATGGGCATATATGTCACCAACTACCAATTCCGCATGGATACTCTGGCCTATGTTCTCTATTACCCTCAGAAGCCTCTTGTTACTACAAGGGCTATGGAGCATCTTCACTTTAGGCAGCTTCCAGCTGGCATTAATGCTATTGTAGCCATTTCATGCTACTCTGGTTATAACCAAGAAGATTCAGTCATTATGAACCAATCTTCAATAGATCGTGGTTTCTTCCGATCTCTGTTCTTCCGTTCATACAGAGATGAGGAGAAAAAGATGGGAACCCTTGTCAAAGAAGACTTTGGGCGGCCTGATAGAGCTAATACCATGGGAATGCGGCATGGCTCTTACGATAAGTTAGATGATGATGGTCTTGCTCCTCCTGGTACAAGAGTTTCGGGTGAAGATGTAATTATTGGAAAGACCACTCCGATATCTCAAGATGAGGCTCAGGGGCAGTCGTCTCGTTACACAAGACGGGATCACAGCATAAGCTTGCGTCATAGTGAAACTGGCATAGTGGATCAGGTATTATTGACGACAAATGCAGATGGTTTGAGGTTTGTGAAAGTTAGGGTAAGATCTGTTAGAATTCCTCAGATTGGGGACAAGTTTAGTAGTAGACATGGACAGAAGGGAACAGTTGGCATGACCTACACTCAAGAGGATATGCCCTGGACCGCTGAAGGCATCACTCCCGACATTATCGTGAATCCACATGCCATTCCATCTCGTATGACGATCGGGCAGCTTATTGAGTGTATCATGGGCAAGGTGGCGGCCCACATGGGCAAGGAAGGAGATGCTACTCCTTTTACAGATGTCACGGTGGAGAACATCAGCAGAGCTCTGCATAAATGTGGGTACCAACAGCGTGGATTTGAGAGAATGTACAATGGTCACACAGGCAGACCACTCACAGCTATGATATTCCTTGGACCAACATATTACCAGAGATTGAAGCACATGGTTGACGACAAGATCCACTCTCGTGGACGAGGTCCAGTCCAGATCCTCACGAGGCAGCCAGCGGAGGGACGATCTCGTGATGGTGGTCTCCGTTTTGGAGAAATGGAACGCGACTGTATGATTGCACATGGTGCTGCCCACTTTCTGAAGGAGAGGTTGTTTGATCAAAGTGATGCATATAGGATACATGTCTGTGAATGCTGTGGGCTCATCGCCATTGCGAATCTAAAGAAGAATTCGTTCGAATGTAGAGGTTGCAAGAACAAAACAGATATTGTTCAGGTGCACATTCCATATGCATGCAAGCTGCTGTTCCAGGAACTTATGTCGATGGCAATTGCGCCAAGGATGCTTACAAAAGATGTGAAATCCGCCAAAGACCATGGAAAGAAGTGA
Protein:  
MEDYNEYEQQYVDEDDDEDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPPSTMFVRMLSRASSKGGSSGQYIRCTLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDKRIKYAKDILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVENQSLLIKKKDIYALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVQAKLRPEEAYSDTYTHCEVHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQSSRYTRRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTAEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVENISRALHKCGYQQRGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDVKSAKDHGKK